STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101158031Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family. (267 aa)    
Predicted Functional Partners:
LOC101172846
Histone H2A; Belongs to the histone H2A family.
   
 
 0.653
LOC101170644
H2A histone family, member Va; Belongs to the histone H2A family.
   
 
 0.653
anp32a
Acidic (leucine-rich) nuclear phosphoprotein 32 family, member A.
   
 0.650
anp32e
Acidic (leucine-rich) nuclear phosphoprotein 32 family, member E.
   
 0.645
anp32b
Acidic (leucine-rich) nuclear phosphoprotein 32 family, member B.
   
 0.645
LOC101164877
LRRcap domain-containing protein.
   
 0.645
LOC101156393
LRRcap domain-containing protein.
   
 0.645
LOC101163979
Anti-silencing function 1Ba histone chaperone.
   
 
 0.625
ASF1B
Uncharacterized protein.
   
 
 0.625
mcph1
Uncharacterized protein.
     
 0.622
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.