STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101161210Clusterin; Belongs to the clusterin family. (452 aa)    
Predicted Functional Partners:
dctn4
Dynactin 4.
      
 0.743
gucd1
Guanylyl cyclase domain containing 1.
      
 0.743
LOC101155036
Protein inhibitor of activated STAT, 2.
      
 0.562
c-fos
BZIP domain-containing protein.
      
 0.560
xrcc6
X-ray repair complementing defective repair in Chinese hamster cells 6.
    
 
 0.537
rbp3
Retinol binding protein 3.
   
  
 0.506
LOC101170893
Complement component c3b, tandem duplicate 2.
   
 
 0.499
LOC101163971
Hydroxysteroid (17-beta) dehydrogenase 12a; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.493
LOC101157238
Interleukin 13 receptor, alpha 2.
      
 0.476
fosl2
Fos-like antigen 2.
      
 0.422
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.