Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC101163736 | snx12 | ENSORLP00000002453 | ENSORLP00000002261 | Sorting nexin 1a. | Sorting nexin 12. | 0.588 |
LOC101163736 | snx2 | ENSORLP00000002453 | ENSORLP00000043960 | Sorting nexin 1a. | Sorting nexin 2. | 0.500 |
LOC101163736 | snx3 | ENSORLP00000002453 | ENSORLP00000016846 | Sorting nexin 1a. | Sorting nexin 3. | 0.588 |
LOC101163736 | vps26a | ENSORLP00000002453 | ENSORLP00000012805 | Sorting nexin 1a. | VPS26, retromer complex component A. | 0.860 |
LOC101163736 | vps26b | ENSORLP00000002453 | ENSORLP00000006560 | Sorting nexin 1a. | VPS26, retromer complex component B. | 0.853 |
LOC101163736 | vps29 | ENSORLP00000002453 | ENSORLP00000022447 | Sorting nexin 1a. | Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway. | 0.931 |
Snx1 | snx2 | ENSORLP00000001946 | ENSORLP00000043960 | Sorting nexin 1b. | Sorting nexin 2. | 0.949 |
Snx1 | vps26a | ENSORLP00000001946 | ENSORLP00000012805 | Sorting nexin 1b. | VPS26, retromer complex component A. | 0.790 |
Snx1 | vps26b | ENSORLP00000001946 | ENSORLP00000006560 | Sorting nexin 1b. | VPS26, retromer complex component B. | 0.780 |
Snx1 | vps29 | ENSORLP00000001946 | ENSORLP00000022447 | Sorting nexin 1b. | Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway. | 0.955 |
itpa | vps29 | ENSORLP00000028610 | ENSORLP00000022447 | Inosine triphosphate pyrophosphatase; Pyrophosphatase that hydrolyzes the non-canonical purine nucleotides inosine triphosphate (ITP), deoxyinosine triphosphate (dITP) as well as 2'-deoxy-N-6-hydroxylaminopurine triposphate (dHAPTP) and xanthosine 5'-triphosphate (XTP) to their respective monophosphate derivatives. The enzyme does not distinguish between the deoxy- and ribose forms. Probably excludes non-canonical purines from RNA and DNA precursor pools, thus preventing their incorporation into RNA and DNA and avoiding chromosomal lesions; Belongs to the HAM1 NTPase family. | Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway. | 0.918 |
snx12 | LOC101163736 | ENSORLP00000002261 | ENSORLP00000002453 | Sorting nexin 12. | Sorting nexin 1a. | 0.588 |
snx12 | snx2 | ENSORLP00000002261 | ENSORLP00000043960 | Sorting nexin 12. | Sorting nexin 2. | 0.588 |
snx12 | snx3 | ENSORLP00000002261 | ENSORLP00000016846 | Sorting nexin 12. | Sorting nexin 3. | 0.901 |
snx12 | tbc1d5 | ENSORLP00000002261 | ENSORLP00000038751 | Sorting nexin 12. | TBC1 domain family, member 5. | 0.435 |
snx12 | vps26a | ENSORLP00000002261 | ENSORLP00000012805 | Sorting nexin 12. | VPS26, retromer complex component A. | 0.961 |
snx12 | vps26b | ENSORLP00000002261 | ENSORLP00000006560 | Sorting nexin 12. | VPS26, retromer complex component B. | 0.965 |
snx12 | vps29 | ENSORLP00000002261 | ENSORLP00000022447 | Sorting nexin 12. | Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway. | 0.933 |
snx2 | LOC101163736 | ENSORLP00000043960 | ENSORLP00000002453 | Sorting nexin 2. | Sorting nexin 1a. | 0.500 |
snx2 | Snx1 | ENSORLP00000043960 | ENSORLP00000001946 | Sorting nexin 2. | Sorting nexin 1b. | 0.949 |
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