STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eappE2f-associated phosphoprotein. (280 aa)    
Predicted Functional Partners:
aar2
AAR2 splicing factor.
    
 
 0.795
prpf8
Pre-mRNA processing factor 8.
    
 
 0.784
ENSORLP00000036349
Uncharacterized protein.
    
 
 0.733
eftud2
Elongation factor Tu GTP binding domain containing 2.
    
 
 0.729
snrnp200
Small nuclear ribonucleoprotein 200 (U5).
    
 
 0.718
cd2bp2
CD2 (cytoplasmic tail) binding protein 2.
    
 
 0.678
gpatch1
G patch domain containing 1.
    
   0.659
dhx35
DEAH-box helicase 35.
   
   0.653
ecd
Ecdysoneless homolog (Drosophila).
    
   0.614
ddx23
DEAD (Asp-Glu-Ala-Asp) box polypeptide 23.
    
 
 0.593
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.