STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
parp9Poly [ADP-ribose] polymerase. (784 aa)    
Predicted Functional Partners:
ENSORLP00000039326
RING-type domain-containing protein.
   
 0.843
LOC101161944
Zgc:66440.
   
 0.767
LOC101175033
Poly [ADP-ribose] polymerase.
  
 
0.518
ifih1
Interferon induced with helicase C domain 1.
   
 
 0.504
cmpk2
Cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial.
  
  
 0.502
ifi35
Interferon-induced protein 35.
   
  
 0.495
LOC101170439
Poly [ADP-ribose] polymerase.
  
 
0.490
LOC101170686
Poly [ADP-ribose] polymerase.
  
 
0.487
parp3
Poly [ADP-ribose] polymerase.
    
 
 0.459
cd63
Tetraspanin.
   
  
 0.411
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.