Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC101159283 | LOC101166429 | ENSORLP00000005095 | ENSORLP00000022740 | Si:dkey-24p1.6. | Zmp:0000000662. | 0.659 |
LOC101159283 | derl1 | ENSORLP00000005095 | ENSORLP00000041992 | Si:dkey-24p1.6. | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | 0.955 |
LOC101159283 | derl2 | ENSORLP00000005095 | ENSORLP00000015770 | Si:dkey-24p1.6. | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | 0.956 |
LOC101159283 | erlec1 | ENSORLP00000005095 | ENSORLP00000013614 | Si:dkey-24p1.6. | Endoplasmic reticulum lectin 1. | 0.889 |
LOC101159283 | katnal2 | ENSORLP00000005095 | ENSORLP00000014904 | Si:dkey-24p1.6. | Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays. | 0.488 |
LOC101159283 | os9 | ENSORLP00000005095 | ENSORLP00000002040 | Si:dkey-24p1.6. | OS9 endoplasmic reticulum lectin. | 0.889 |
LOC101159283 | spata5l1 | ENSORLP00000005095 | ENSORLP00000003033 | Si:dkey-24p1.6. | Spermatogenesis associated 5-like 1. | 0.842 |
LOC101159283 | ube2g2 | ENSORLP00000005095 | ENSORLP00000045287 | Si:dkey-24p1.6. | Ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family. | 0.432 |
LOC101159283 | vcp | ENSORLP00000005095 | ENSORLP00000010644 | Si:dkey-24p1.6. | Valosin containing protein; Belongs to the AAA ATPase family. | 0.842 |
LOC101166429 | LOC101159283 | ENSORLP00000022740 | ENSORLP00000005095 | Zmp:0000000662. | Si:dkey-24p1.6. | 0.659 |
LOC101166429 | derl1 | ENSORLP00000022740 | ENSORLP00000041992 | Zmp:0000000662. | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | 0.773 |
LOC101166429 | derl2 | ENSORLP00000022740 | ENSORLP00000015770 | Zmp:0000000662. | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | 0.794 |
LOC101166429 | erlec1 | ENSORLP00000022740 | ENSORLP00000013614 | Zmp:0000000662. | Endoplasmic reticulum lectin 1. | 0.781 |
LOC101166429 | katnal2 | ENSORLP00000022740 | ENSORLP00000014904 | Zmp:0000000662. | Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays. | 0.764 |
LOC101166429 | os9 | ENSORLP00000022740 | ENSORLP00000002040 | Zmp:0000000662. | OS9 endoplasmic reticulum lectin. | 0.781 |
LOC101166429 | sel1l | ENSORLP00000022740 | ENSORLP00000022641 | Zmp:0000000662. | SEL1L adaptor subunit of ERAD E3 ubiquitin ligase. | 0.659 |
LOC101166429 | spata5l1 | ENSORLP00000022740 | ENSORLP00000003033 | Zmp:0000000662. | Spermatogenesis associated 5-like 1. | 0.776 |
LOC101166429 | ube2g2 | ENSORLP00000022740 | ENSORLP00000045287 | Zmp:0000000662. | Ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family. | 0.696 |
LOC101166429 | vcp | ENSORLP00000022740 | ENSORLP00000010644 | Zmp:0000000662. | Valosin containing protein; Belongs to the AAA ATPase family. | 0.776 |
derl1 | LOC101159283 | ENSORLP00000041992 | ENSORLP00000005095 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | Si:dkey-24p1.6. | 0.955 |
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