STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101173752IGv domain-containing protein. (224 aa)    
Predicted Functional Partners:
H2M4T3_ORYLA
Uncharacterized protein.
     
  0.900
LOC101167049
CD40 ligand; Belongs to the tumor necrosis factor family.
   
  
 0.689
LOC100301586
CD40 molecule, TNF receptor superfamily member 5.
      
 0.670
cd276
CD276 molecule.
      
 0.560
H2MVB2_ORYLA
G protein-coupled receptor 132a; Belongs to the G-protein coupled receptor 1 family.
  
    0.501
ptprc
Protein tyrosine phosphatase receptor type C.
   
  
 0.425
grb2
Growth factor receptor-bound protein 2b.
   
 
 0.420
palmd
Uncharacterized protein.
  
    0.413
LOC105355909
Uncharacterized protein.
  
  
 0.408
LOC101165394
GRB2 related adaptor protein 2a.
   
 
 0.405
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.