STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101156391Ig-like domain-containing protein. (254 aa)    
Predicted Functional Partners:
cd74
CD74 molecule, major histocompatibility complex, class II invariant chain a.
   
 0.980
ENSORLP00000035474
Ig-like domain-containing protein.
    
  0.940
LOC100125525
Uncharacterized protein.
   
 0.925
rps14
Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
 0.816
ENSORLP00000040565
Uncharacterized protein.
   
  0.740
LOC101163459
Nonclassical MHC class II antigen alpha chain.
 
 
0.716
LOC101156150
Nonclassical MHC class II antigen alpha chain.
 
 
0.713
LOC100125446
Insulin; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver.
    
 
 0.644
LOC101172253
Insulin; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver.
    
 
 0.644
rpl30
Ribosomal protein L30.
    
 0.633
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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