STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110016550Eukaryotic translation initiation factor 2-alpha kinase 2. (678 aa)    
Predicted Functional Partners:
ripk1
Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.
  
0.935
nfe2l2
Nuclear factor, erythroid 2-like 2a.
   
 0.917
ifih1
Interferon induced with helicase C domain 1.
   
 0.765
rsad2
Radical S-adenosyl methionine domain containing 2.
   
  
 0.761
hspa5
Uncharacterized protein; Belongs to the heat shock protein 70 family.
   
 0.756
ilf3
Interleukin enhancer binding factor 3b.
    
 
 0.719
eif2s2
Eukaryotic translation initiation factor 2, subunit 2 beta.
   
 
 0.707
eif2s3
Eukaryotic translation initiation factor 2, subunit 3 gamma.
   
 
 0.701
LOC101162092
Ubiquitin specific peptidase 18; Belongs to the peptidase C19 family.
   
 
 0.700
LOC101163162
Myxovirus (influenza) resistance B; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
 0.644
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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