STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phlda2Pleckstrin homology-like domain, family A, member 2. (138 aa)    
Predicted Functional Partners:
bmpr2
Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
      
 0.675
flt1
Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
      
 0.675
itgav
Integrin, alpha V; Belongs to the integrin alpha chain family.
      
 0.675
LOC101161906
Transmembrane p24 trafficking protein 2.
      
 0.675
e2f8
E2F transcription factor 8.
      
 0.675
slc22a18
Solute carrier family 22 member 18.
      
 0.629
ENSORLP00000036349
Uncharacterized protein.
      
 0.559
LOC101172303
Nucleosome assembly protein 1-like 4b; Belongs to the nucleosome assembly protein (NAP) family.
      
 0.558
igf2
Insulin-like growth factor 2b.
      
 0.558
dnajb6
DnaJ heat shock protein family (Hsp40) member B6b.
      
 0.552
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.