STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101174653Cyclic nucleotide gated channel subunit alpha 1b. (538 aa)    
Predicted Functional Partners:
ENSORLP00000031918
Cyclic nucleotide gated channel beta 1a.
  
0.975
calm3
Calmodulin-A; Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases.
     
 0.921
calml4
Calmodulin-like 4a.
     
 0.913
ENSORLP00000043644
Cyclic nucleotide gated channel subunit alpha 1a.
  
 
0.903
LOC101157535
Si:dkey-44k1.5.
  
0.879
LOC101156692
Cyclic nucleotide gated channel beta 3, tandem duplicate 1.
  
0.864
LOC101156926
Cyclic nucleotide gated channel beta 3, tandem duplicate 2.
  
0.863
LOC111946430
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
   
  
 0.671
LOC101162405
Cyclic nucleotide gated channel subunit alpha 4.
  
  
0.599
LOC101168622
Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog a.
   
  
 0.577
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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