STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101169903Solute carrier family 22 member 7b, tandem duplicate 3. (533 aa)    
Predicted Functional Partners:
ints9
Integrator complex subunit 9.
    
 0.486
ints1
DUF3677 domain-containing protein.
    
 0.472
ints7
Integrator complex subunit 7.
    
 0.465
ints4
Integrator complex subunit 4.
    
 0.456
ints3
Integrator complex subunit 3.
    
 0.455
ints13
Integrator complex subunit 13.
    
 0.451
ints11
Integrator complex subunit 11.
    
 0.447
usp40
Ubiquitin specific peptidase 40; Belongs to the peptidase C19 family.
   
  
 0.445
anapc11
APC11 anaphase promoting complex subunit 11 homolog (yeast).
      
 0.443
luc7l
LUC7-like (S. cerevisiae).
      
 0.441
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.