STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101171650Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (514 aa)    
Predicted Functional Partners:
mstn
TGF_BETA_2 domain-containing protein.
   
 0.980
bmp2
TGF_BETA_2 domain-containing protein.
   
 0.979
bmp4
Bone morphogenetic protein 4.
   
 0.979
LOC101163346
Bone morphogenetic protein 16.
   
 0.979
INHBB
Inhibin subunit beta B.
   
 0.972
LOC100144359
TGF_BETA_2 domain-containing protein.
   
 0.972
LOC101170230
Inhibin subunit beta Aa.
   
 0.972
gdf11
Growth differentiation factor 11.
   
 0.966
bmp5
Bone morphogenetic protein 5.
   
 0.957
bmp6
Bone morphogenetic protein 6.
   
 0.956
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.