STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttc26Tetratricopeptide repeat domain 26. (557 aa)    
Predicted Functional Partners:
ift57
Intraflagellar transport 57 homolog (Chlamydomonas).
  
 
 0.995
ift52
Intraflagellar transport 52 homolog (Chlamydomonas).
  
 0.995
ift80
Intraflagellar transport 80 homolog (Chlamydomonas).
  
 0.994
ift81
Intraflagellar transport 81 homolog.
   
 0.994
cluap1
Clusterin associated protein 1.
  
 
 0.994
ift88
Intraflagellar transport 88 homolog.
  
 0.993
LOC101171914
Fleer.
  
 
 0.992
traf3ip1
TNF receptor-associated factor 3 interacting protein 1.
    
 0.987
ift172
Intraflagellar transport 172.
    
 0.986
LOC101154808
Uncharacterized protein.
  
 0.986
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.