STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc6a15Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (735 aa)    
Predicted Functional Partners:
slc43a3
Solute carrier family 43 member 3b.
      
 0.670
LOC101157623
Hcy-binding domain-containing protein; Involved in the regulation of homocysteine metabolism.
      
 0.604
slc39a4
ZIP4_domain domain-containing protein.
  
  
 0.593
LOC101175580
Betaine-homocysteine methyltransferase; Involved in the regulation of homocysteine metabolism.
      
 0.522
slc30a9
Solute carrier family 30 member 9.
  
  
 0.481
cltrn
Si:dkey-194e6.1.
    
 
 0.457
LOC101168473
Annexin.
   
  
 0.434
LOC101156458
Apolipoprotein Ba.
      
 0.408
anxa2
Annexin.
   
  
 0.408
LOC101167451
Annexin.
   
  
 0.407
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.