STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glb1Beta-galactosidase. (653 aa)    
Predicted Functional Partners:
gla
Alpha-galactosidase.
  
 
 0.948
galns
Galactosamine (N-acetyl)-6-sulfatase.
   
 0.944
hexb
Beta-hexosaminidase.
  
 
 0.933
LOC101172329
Beta-hexosaminidase.
  
 
 0.933
gba
Glucosylceramidase.
  
 0.930
galm
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
 0.929
ugcg
UDP-glucose ceramide glucosyltransferase.
   
 
 0.921
gba2
Non-lysosomal glucosylceramidase; Non-lysosomal glucosylceramidase that catalyzes the hydrolysis of glucosylceramide (GlcCer) to free glucose and ceramide.
     
 0.919
LOC101164824
Glucosamine (N-acetyl)-6-sulfatase (Sanfilippo disease IIID), b.
  
 0.916
st3gal2
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
   
 
 0.913
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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