STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101160393Ankyrin repeat and SOCS box containing 5a. (327 aa)    
Predicted Functional Partners:
eloc
Elongin C paralog b; Belongs to the SKP1 family.
    
 0.756
ELOB
Ubiquitin-like domain-containing protein.
    
 0.677
asb6
Ankyrin repeat and SOCS box containing 6.
  
 
 0.570
ENSORLP00000028016
ANK_REP_REGION domain-containing protein.
  
 
  0.547
CUL5
Cullin 5; Belongs to the cullin family.
    
 0.544
LOC101154889
Cullin 5; Belongs to the cullin family.
    
 0.544
commd8
COMM domain containing 8.
   
  0.521
commd1
Copper metabolism (Murr1) domain containing 1.
    
  0.515
ENSORLP00000041234
ANK_REP_REGION domain-containing protein.
  
  
 0.513
cdkn2c
Cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4).
  
 
   0.511
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.