STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptges2Prostaglandin E synthase 2-like. (412 aa)    
Predicted Functional Partners:
ptges
Prostaglandin E synthase.
     
 0.954
ptges3
Prostaglandin E synthase 3b (cytosolic).
     
 0.946
LOC101161606
Prostaglandin E synthase 3a (cytosolic).
     
 0.946
ptgs2
EGF-like domain-containing protein.
     
 0.932
tbxas1
Thromboxane A synthase 1 (platelet); Belongs to the cytochrome P450 family.
     
 0.932
LOC101173634
Prostaglandin-endoperoxide synthase 1.
     
 0.926
LOC101161174
Prostaglandin-endoperoxide synthase 1.
     
 0.926
PTGIS
Prostaglandin I2 synthase; Belongs to the cytochrome P450 family.
     
 0.915
cbr1
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.910
prxl2b
Peroxiredoxin like 2B.
     
 0.903
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.