STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101154931Serine protease 1; Belongs to the peptidase S1 family. (259 aa)    
Predicted Functional Partners:
LOC105353609
F2R like thrombin or trypsin receptor 3; Belongs to the G-protein coupled receptor 1 family.
    
  0.743
LOC101167634
Coagulation factor II thrombin receptor.
    
 0.738
LOC105354743
Coagulation factor II (thrombin) receptor-like 2.
    
  0.724
F2RL2
Coagulation factor II thrombin receptor like 2.
    
  0.724
LOC101174360
Coagulation factor II (thrombin) receptor-like 1, tandem duplicate 2.
   
 0.711
LOC101167884
Coagulation factor II (thrombin) receptor-like 1, tandem duplicate 1.
   
 0.711
H2M1G9_ORYLA
Coagulation factor II (thrombin) receptor; Belongs to the G-protein coupled receptor 1 family.
    
 0.710
pard3
Par-3 family cell polarity regulator alpha, b.
     
  0.650
PARD3
Par-3 family cell polarity regulator.
     
  0.650
ENSORLP00000043209
Alpha-1-microglobulin/bikunin precursor.
   
 0.640
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.