STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrpl58Mitochondrial ribosomal protein L58. (183 aa)    
Predicted Functional Partners:
mrpl27
Mitochondrial ribosomal protein L27.
  
 
 0.997
MRPL21
Mitochondrial ribosomal protein L21.
  
   0.991
mrpl19
Mitochondrial ribosomal protein L19.
  
 
 0.990
mrpl33
Mitochondrial ribosomal protein L33.
  
 
 0.987
Mrps6
Mitochondrial ribosomal protein S6.
  
 
 0.981
mrps16
Mitochondrial ribosomal protein S16.
  
 
 0.979
mrpl9
Mitochondrial ribosomal protein L9.
  
 
 0.976
mrpl12
Mitochondrial ribosomal protein L12.
  
 
 0.970
mrpl20
Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.
  
 
 0.970
kars1
Lysine--tRNA ligase.
  
 
 0.969
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.