STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Crebl2cAMP responsive element binding protein-like 2. (140 aa)    
Predicted Functional Partners:
kcnk6
Potassium channel subfamily K member.
      
 0.821
crebrf
Creb3 regulatory factor.
   
 
 0.676
slc41a2
Solute carrier family 41 member 2b.
      
 0.663
borcs6
Si:dkey-72l14.4.
    
 
 0.571
LOC101155498
Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family.
      
 0.569
snapin
SNAP associated protein.
   
 
 0.543
bloc1s1
Biogenesis of lysosomal organelles complex-1, subunit 1.
    
 
 0.510
borcs7
BLOC-1 related complex subunit 7.
    
 
 0.506
borcs8
BLOC-1 related complex subunit 8.
    
 
 0.506
kxd1
KxDL motif containing 1.
    
 
 0.494
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.