STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101163552Uncharacterized protein. (920 aa)    
Predicted Functional Partners:
alg14
ALG14 UDP-N-acetylglucosaminyltransferase subunit.
   
 0.994
dpagt1
Uncharacterized protein.
   
 0.984
alg13
Zgc:92907.
 
   
  0.976
alg1
ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase.
    
 0.975
LOC101165891
IL2RB_N1 domain-containing protein.
   
 0.937
ENSORLP00000034044
Interleukin; Belongs to the IL-15/IL-21 family.
   
 0.852
LOC101162152
Ras-related GTP binding A.
    
 0.704
alg2
ALG2 alpha-1,3/1,6-mannosyltransferase.
    
 0.676
ENSORLP00000030535
Fibronectin type-III domain-containing protein.
   
 0.667
pigf
Phosphatidylinositol glycan anchor biosynthesis, class F.
      
 0.635
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.