STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptges3Prostaglandin E synthase 3b (cytosolic). (159 aa)    
Predicted Functional Partners:
ptges
Prostaglandin E synthase.
     
 0.956
ptges2
Prostaglandin E synthase 2-like.
     
 0.946
stip1
Stress-induced phosphoprotein 1.
   
 0.944
LOC101169506
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.
   
 0.940
hsp90ab1
Heat shock protein 90, alpha (cytosolic), class B member 1.
   
 0.940
ppp5c
Serine/threonine-protein phosphatase.
    
 0.932
cbr1
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 0.930
ptgs2
EGF-like domain-containing protein.
     
 0.924
PTGIS
Prostaglandin I2 synthase; Belongs to the cytochrome P450 family.
     
 0.922
LOC101173634
Prostaglandin-endoperoxide synthase 1.
     
 0.920
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.