STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rfc4Replication factor C (activator 1) 4. (355 aa)    
Predicted Functional Partners:
rfc3
Replication factor C (activator 1) 3.
   
0.999
rad17
RAD17 checkpoint clamp loader component.
   
 0.999
rfc2
Replication factor C (activator 1) 2.
  
0.999
rfc5
Replication factor C (activator 1) 5.
  
0.999
pcna
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.999
rfc1
Replication factor C subunit 1.
   
 0.999
hus1
Checkpoint protein; Belongs to the HUS1 family.
   
 0.984
chtf18
AAA domain-containing protein.
   
 0.983
prim1
DNA primase; Belongs to the eukaryotic-type primase small subunit family.
   
 0.983
rad1
RAD1 homolog (S. pombe).
   
 0.979
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.