STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rhoqRas homolog family member Q. (242 aa)    
Predicted Functional Partners:
exoc7
Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
    
 0.957
TRIP10
Thyroid hormone receptor interactor 10b.
    
 0.948
rapgef1
Uncharacterized protein.
   
 0.948
trip10
Thyroid hormone receptor interactor 10a.
    
 0.948
crk
CRK proto-oncogene, adaptor protein.
   
 
 0.932
crkl
V-crk avian sarcoma virus CT10 oncogene homolog-like.
   
 
 0.932
LOC110016423
Uncharacterized protein.
   
 
 0.932
H2M6E4_ORYLA
Uncharacterized protein.
    
 0.902
LOC101165932
Intersectin 2a.
    
 0.902
ENSORLP00000034742
Uncharacterized protein.
    
 0.902
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.