STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSORLP00000026144Uncharacterized protein. (742 aa)    
Predicted Functional Partners:
ENSORLP00000040096
Uncharacterized protein.
 
     0.921
ENSORLP00000035310
Uncharacterized protein.
 
     0.918
ENSORLP00000038176
Uncharacterized protein.
 
     0.917
ENSORLP00000041222
Uncharacterized protein.
 
     0.917
ENSORLP00000031069
KASH domain-containing protein.
 
     0.914
ENSORLP00000037196
Uncharacterized protein.
 
     0.813
ENSORLP00000044017
Spectrin repeat containing, nuclear envelope 2b.
 
      0.812
LOC101168604
Lamin L3; Belongs to the intermediate filament family.
    
 0.666
LOC101160250
Uncharacterized protein; Belongs to the intermediate filament family.
    
 0.627
H2MTR4_ORYLA
KASH domain-containing protein.
 
      0.620
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.