STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tbcaTubulin-specific chaperone A; Belongs to the TBCA family. (285 aa)    
Predicted Functional Partners:
tbce
Tubulin folding cofactor E.
    
 0.868
tbcd
Tubulin folding cofactor D.
    
 0.752
tbcb
Tubulin folding cofactor B.
   
 
 0.695
pfdn1
Prefoldin subunit 1.
   
  
 0.668
H2LEF2_ORYLA
Tubulin domain-containing protein.
   
 0.642
LOC101164232
Tubulin domain-containing protein.
   
 0.642
LOC101157969
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
 0.642
H2MNV5_ORYLA
Tubulin domain-containing protein.
   
 0.642
LOC101162245
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
 0.642
ENSORLP00000037597
Tubulin domain-containing protein.
   
 0.642
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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