STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101171229Amine oxidase. (520 aa)    
Predicted Functional Partners:
TYR
Tyrosinase.
   
 0.917
tyr
Tyrosinase; This is a copper-containing oxidase that functions in the formation of pigments such as melanins and other polyphenolic compounds.
   
  0.910
maob
Amine oxidase.
  
  
0.909
LOC101160780
Amine oxidase.
  
  
0.908
LOC101175668
Amine oxidase.
  
  
0.907
LOC101175580
Betaine-homocysteine methyltransferase; Involved in the regulation of homocysteine metabolism.
     
  0.905
LOC101157623
Hcy-binding domain-containing protein; Involved in the regulation of homocysteine metabolism.
     
  0.905
aoc1
Amine oxidase.
     
 0.905
th2
BH4_AAA_HYDROXYL_2 domain-containing protein.
     
 0.905
th
Tyrosine hydroxylase 1.
     
 0.905
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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