STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101163906Uncharacterized protein. (140 aa)    
Predicted Functional Partners:
agt
Angiotensinogen; Belongs to the serpin family.
   
 0.671
atp6ap2
ATPase H+ transporting accessory protein 2.
   
 0.566
ctsh
Cathepsin H; Belongs to the peptidase C1 family.
   
 0.550
LOC101161416
Cathepsin F; Belongs to the peptidase C1 family.
   
 0.480
ctsc
Cathepsin C; Belongs to the peptidase C1 family.
   
 0.471
ctsb
Cathepsin Ba; Belongs to the peptidase C1 family.
   
 0.455
LOC101165526
Cathepsin Bb; Belongs to the peptidase C1 family.
   
 0.455
ctso
Cathepsin O; Belongs to the peptidase C1 family.
   
 0.442
LOC101171361
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
   
 0.427
LOC100125446
Insulin; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver.
   
 0.427
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.