STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101155978Piccolo presynaptic cytomatrix protein a. (3918 aa)    
Predicted Functional Partners:
Unc79
Uncharacterized protein.
   
 0.798
LOC101161995
Platelet endothelial aggregation receptor 1.
     
 0.636
LOC101156568
Bassoon (presynaptic cytomatrix protein) b.
  
0.620
sharpin
SHANK-associated RH domain interacting protein.
    
 0.619
tspan11
Tetraspanin.
      
 0.601
LOC101160447
RAN binding protein 2.
    
 0.537
LOC101173223
Extended synaptotagmin-like protein 1a.
   
 
 0.530
LOC101166047
Glutamate receptor, metabotropic 3.
   
 
 0.483
Tep1
Uncharacterized protein.
   
 0.468
ENSORLP00000040907
TROVE domain-containing protein.
   
 0.468
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.