STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
coasyCoA synthase. (566 aa)    
Predicted Functional Partners:
dcakd
Dephospho-CoA kinase domain containing.
  
 
0.985
LOC101175261
Pantothenate kinase 1a.
    
 0.967
LOC101161204
Pantothenate kinase 2.
    
 0.967
ppcs
Phosphopantothenoylcysteine synthetase.
  
 0.961
ppcdc
Phosphopantothenoylcysteine decarboxylase.
  
 0.960
aasdhppt
Aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase.
     
 0.920
LOC101171013
Uncharacterized protein.
     
  0.900
LOC101155077
Ectonucleotide pyrophosphatase/phosphodiesterase 1.
     
  0.900
adsl
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
    
 0.850
atp6v1f
V-type proton ATPase subunit F; Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
    
  0.834
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.