STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DUSP13Dual specificity protein phosphatase; Dual specificity phosphatase able to dephosphorylate phosphotyrosine, phosphoserine and phosphothreonine residues, with a preference for phosphotyrosine as a substrate. Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (182 aa)    
Predicted Functional Partners:
LOC101173165
AP-3 complex subunit mu-1; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane and may be directly involved in trafficking to lysosomes; Belongs to the adaptor complexes medium subunit family.
   
  
 0.844
kat6b
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 
 0.817
aadac
Arylacetamide deacetylase.
   
  
 0.811
TPPP
Tubulin polymerization promoting protein.
   
  
 0.674
LOC101167683
Tubulin polymerization-promoting protein family member 2.
      
 0.589
Mrm1
Mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae).
   
  
 0.573
SAMD8
Sterile alpha motif domain containing 8.
      
 0.546
LOC101167981
SAM domain-containing protein.
      
 0.546
npr3
ANF_receptor domain-containing protein.
      
 0.513
vrk3
VRK serine/threonine kinase 3.
    
 0.491
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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