STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSORLP00000026521Uncharacterized protein. (877 aa)    
Predicted Functional Partners:
unc13a
Uncharacterized protein.
    
0.992
UNC13C
Unc-13 homolog C.
    
0.992
UNC13A
Unc-13 homolog A.
    
0.992
LOC101159330
Unc-13 homolog Ba (C. elegans).
    
0.992
UNC13B
Unc-13 homolog B.
    
0.992
LOC101159330-2
Uncharacterized protein.
    
 0.992
UNC13C-2
Uncharacterized protein.
    
 0.992
LOC105355399
Si:ch211-105f12.2.
    
 0.988
tspoap1
Uncharacterized protein.
    
 0.988
Rimbp2
RIMS binding protein 2.
    
 0.988
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.