STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dccDCC netrin 1 receptor. (1501 aa)    
Predicted Functional Partners:
appl2
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
   
  0.957
appl1
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.
   
  0.957
LOC101164509
Netrin 5.
    
 0.899
LOC101160359
Netrin 2.
    
 0.899
NTN1
Netrin 1.
    
 0.897
LOC101161061
Netrin 1b.
    
 0.896
draxin
Dorsal inhibitory axon guidance protein.
    
 
 0.792
trim9
Tripartite motif containing 9.
   
 
 0.718
LOC101170662
RGM domain family, member D.
   
 0.687
LOC101171109
Hemojuvelin BMP co-receptor.
   
 0.687
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.