STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atp23Mitochondrial inner membrane protease ATP23; Belongs to the peptidase M76 family. (253 aa)    
Predicted Functional Partners:
phb2
Prohibitin.
    
 
 0.721
phb
Prohibitin.
    
 
 0.721
mipep
Mitochondrial intermediate peptidase.
      
 0.674
dpp3
Dipeptidyl peptidase 3; Belongs to the peptidase M49 family.
      
 0.673
xpnpep3
X-prolyl aminopeptidase 3, mitochondrial.
      
 0.641
LOC101169354
CHCH domain-containing protein.
    
 
 0.638
zmpste24
CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family.
    
 
 0.607
oxa1l
OXA1L mitochondrial inner membrane protein.
   
 
 0.597
timm10
Translocase of inner mitochondrial membrane 10 homolog (yeast).
   
 
 0.594
immp2l
Inner mitochondrial membrane peptidase subunit 2.
    
 
 0.588
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (30%) [HD]