Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC101157486 | LOC101172571 | ENSORLP00000005946 | ENSORLP00000042398 | Zgc:110269. | FA complementation group D2. | 0.436 |
LOC101157486 | MUTYH | ENSORLP00000005946 | ENSORLP00000004815 | Zgc:110269. | Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. | 0.489 |
LOC101157486 | exo1 | ENSORLP00000005946 | ENSORLP00000002230 | Zgc:110269. | Exonuclease 1. | 0.845 |
LOC101157486 | fancm | ENSORLP00000005946 | ENSORLP00000018174 | Zgc:110269. | Uncharacterized protein. | 0.892 |
LOC101157486 | helq | ENSORLP00000005946 | ENSORLP00000045595 | Zgc:110269. | Helicase, POLQ like. | 0.667 |
LOC101157486 | mre11 | ENSORLP00000005946 | ENSORLP00000009106 | Zgc:110269. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.956 |
LOC101157486 | neil3 | ENSORLP00000005946 | ENSORLP00000025238 | Zgc:110269. | Nei-like DNA glycosylase 3. | 0.692 |
LOC101157486 | poln | ENSORLP00000005946 | ENSORLP00000027621 | Zgc:110269. | Polymerase (DNA directed) nu. | 0.667 |
LOC101157486 | rad50 | ENSORLP00000005946 | ENSORLP00000037867 | Zgc:110269. | RAD50 homolog, double strand break repair protein. | 0.897 |
LOC101172571 | LOC101157486 | ENSORLP00000042398 | ENSORLP00000005946 | FA complementation group D2. | Zgc:110269. | 0.436 |
LOC101172571 | exo1 | ENSORLP00000042398 | ENSORLP00000002230 | FA complementation group D2. | Exonuclease 1. | 0.690 |
LOC101172571 | fancm | ENSORLP00000042398 | ENSORLP00000018174 | FA complementation group D2. | Uncharacterized protein. | 0.998 |
LOC101172571 | fen1 | ENSORLP00000042398 | ENSORLP00000036681 | FA complementation group D2. | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | 0.445 |
LOC101172571 | helq | ENSORLP00000042398 | ENSORLP00000045595 | FA complementation group D2. | Helicase, POLQ like. | 0.751 |
LOC101172571 | mre11 | ENSORLP00000042398 | ENSORLP00000009106 | FA complementation group D2. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.496 |
LOC101172571 | neil3 | ENSORLP00000042398 | ENSORLP00000025238 | FA complementation group D2. | Nei-like DNA glycosylase 3. | 0.599 |
LOC101172571 | poln | ENSORLP00000042398 | ENSORLP00000027621 | FA complementation group D2. | Polymerase (DNA directed) nu. | 0.758 |
MUTYH | LOC101157486 | ENSORLP00000004815 | ENSORLP00000005946 | Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. | Zgc:110269. | 0.489 |
MUTYH | fen1 | ENSORLP00000004815 | ENSORLP00000036681 | Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | 0.489 |
MUTYH | helq | ENSORLP00000004815 | ENSORLP00000045595 | Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. | Helicase, POLQ like. | 0.645 |
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