STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cenphCENP-H domain-containing protein. (232 aa)    
Predicted Functional Partners:
cenpk
Centromere protein K.
   
  0.617
cenpn
Centromere protein N.
   
 0.598
cenpm
Proliferation associated nuclear element.
   
  0.596
cenpi
Centromere protein I.
   
 0.582
H2MZX5_ORYLA
Centromere protein P.
   
  0.546
cenpw
Uncharacterized protein.
   
 
  0.527
cenpq
Uncharacterized protein.
   
 
  0.501
CENPS
Centromere protein S.
     
 0.481
LOC101173302
Cortistatin.
     
 0.481
nuf2
UF2 component of NDC80 kinetochore complex.
   
 
 0.465
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.