Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSORLP00000033948 | NFIX | ENSORLP00000033948 | ENSORLP00000027752 | Homeobox A5a. | Nuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. | 0.449 |
ENSORLP00000033948 | gata2 | ENSORLP00000033948 | ENSORLP00000001688 | Homeobox A5a. | Transcription factor GATA-2. | 0.423 |
ENSORLP00000033948 | plagl2 | ENSORLP00000033948 | ENSORLP00000033714 | Homeobox A5a. | Pleiomorphic adenoma gene-like 2. | 0.402 |
NFIX | ENSORLP00000033948 | ENSORLP00000027752 | ENSORLP00000033948 | Nuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. | Homeobox A5a. | 0.449 |
NFIX | gata2 | ENSORLP00000027752 | ENSORLP00000001688 | Nuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. | Transcription factor GATA-2. | 0.406 |
NFIX | plagl2 | ENSORLP00000027752 | ENSORLP00000033714 | Nuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. | Pleiomorphic adenoma gene-like 2. | 0.402 |
gata2 | ENSORLP00000033948 | ENSORLP00000001688 | ENSORLP00000033948 | Transcription factor GATA-2. | Homeobox A5a. | 0.423 |
gata2 | NFIX | ENSORLP00000001688 | ENSORLP00000027752 | Transcription factor GATA-2. | Nuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. | 0.406 |
gata2 | plagl2 | ENSORLP00000001688 | ENSORLP00000033714 | Transcription factor GATA-2. | Pleiomorphic adenoma gene-like 2. | 0.464 |
plagl2 | ENSORLP00000033948 | ENSORLP00000033714 | ENSORLP00000033948 | Pleiomorphic adenoma gene-like 2. | Homeobox A5a. | 0.402 |
plagl2 | NFIX | ENSORLP00000033714 | ENSORLP00000027752 | Pleiomorphic adenoma gene-like 2. | Nuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. | 0.402 |
plagl2 | gata2 | ENSORLP00000033714 | ENSORLP00000001688 | Pleiomorphic adenoma gene-like 2. | Transcription factor GATA-2. | 0.464 |