STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101161906Transmembrane p24 trafficking protein 2. (207 aa)    
Predicted Functional Partners:
tmed10
Transmembrane p24 trafficking protein 10.
   
0.999
LOC101173315
Transmembrane p24 trafficking protein 9.
   
0.976
LOC101175398
Transmembrane p24 trafficking protein 4.
   
0.976
LOC101164569
Si:ch211-255i20.3.
   
0.970
LOC101168626
Transmembrane p24 trafficking protein 7.
   
0.936
LOC101154981
Toll-like receptor adaptor molecule 1.
   
 0.936
LOC101155019
Transmembrane p24 trafficking protein 3.
   
0.936
surf4
Surfeit 4.
   
 0.906
sec13
SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.
    
 0.868
lman1
Lectin, mannose-binding, 1.
   
 0.856
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.