STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101167325Spermidine/spermine N1-acetyltransferase family member 2a. (169 aa)    
Predicted Functional Partners:
LOC101174286
Spermidine/spermine N1-acetyltransferase family member 2b.
  
 
0.935
srm
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
    
 0.930
agmat
Agmatine ureohydrolase (agmatinase); Belongs to the arginase family.
  
 
 0.922
odc1
Ornithine decarboxylase 1; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
 0.919
sat1
Spermidine/spermine N1-acetyltransferase 1b.
  
  
 
0.905
maob
Amine oxidase.
     
 0.905
LOC101175668
Amine oxidase.
     
 0.905
aoc1
Amine oxidase.
     
 0.902
LOC101170101
Glutamine--fructose-6-phosphate transaminase 1.
  
 0.511
LOC101160918
Glutamine-fructose-6-phosphate transaminase 2.
  
 0.511
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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