STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rfkRiboflavin kinase. (168 aa)    
Predicted Functional Partners:
Flad1
MoCF_biosynth domain-containing protein.
    
 0.979
iyd
Iodotyrosine deiodinase.
    
 0.911
acp1
LMWPc domain-containing protein.
    
 0.908
LOC101171013
Uncharacterized protein.
  
 
 0.901
LOC101155077
Ectonucleotide pyrophosphatase/phosphodiesterase 1.
  
 
 0.901
acp2
Acid phosphatase 2, lysosomal; Belongs to the histidine acid phosphatase family.
     
  0.900
trmu
tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase.
  
 
  0.857
fdx2
Ferredoxin 2.
     
 0.847
fdx1
2Fe-2S ferredoxin-type domain-containing protein.
     
 0.847
sugct
Succinyl-CoA:glutarate-CoA transferase.
   
 
  0.839
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.