STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSORLP00000028011Ig-like domain-containing protein. (144 aa)    
Predicted Functional Partners:
robo4
Roundabout, axon guidance receptor, homolog 4 (Drosophila).
 
      0.690
slit2
Slit homolog 2 (Drosophila).
   
 0.682
ENSORLP00000042330
Uncharacterized protein.
   
 0.682
slit1
Slit homolog 1a (Drosophila).
   
 0.682
nyx
Nyctalopin.
   
 0.677
LOC101170687
Slit homolog 3 (Drosophila).
   
 0.677
abl2
Tyrosine-protein kinase.
   
 0.500
abl1
Tyrosine-protein kinase.
   
 0.500
LRRC3
Leucine rich repeat containing 3.
   
 0.492
H2L2W9_ORYLA
Uncharacterized protein.
   
 0.492
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.