STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSORLP00000028045Si:dkey-177p2.6. (252 aa)    
Predicted Functional Partners:
cdca4
Cell division cycle associated 4.
  
   
 0.631
sec61g
SEC61 translocon gamma subunit.
      
 0.497
LOC101156607
Nitric oxide synthase 1 (neuronal) adaptor protein b.
      
 0.491
LOC101157471
Si:dkey-34e4.1.
      
 0.491
LOC101163480
PID domain-containing protein.
      
 0.491
LOC105357543
SERTA domain containing 4.
      
 0.474
GPR119
G protein-coupled receptor 119; Belongs to the G-protein coupled receptor 1 family.
  
     0.442
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.