STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
znf451Zinc finger protein 451. (852 aa)    
Predicted Functional Partners:
LOC101169703
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.840
ube2i
Ubiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.840
kctd2
Potassium channel tetramerization domain containing 2.
    
 0.752
sumo2
Small ubiquitin-related modifier.
    
 0.706
sumo2-2
Small ubiquitin-related modifier.
    
 0.706
sumo4
Small ubiquitin-related modifier.
    
 0.706
sumo1
Small ubiquitin-related modifier.
    
 0.642
LOC101160693
Ran GTPase activating protein 1b.
    
 
 0.592
rangap1
RAN GTPase activating protein 1a.
    
 
 0.592
sae1
SUMO1 activating enzyme subunit 1.
     
 0.495
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.