STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101163229Bromodomain containing 1b. (1167 aa)    
Predicted Functional Partners:
meaf6
MYST/Esa1-associated factor 6.
    
 0.909
kat6a
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.825
kat6b
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.825
ing4
Inhibitor of growth protein.
    
 0.790
LOC101156010
Bromodomain and PHD finger containing, 3b.
  
0.789
LOC101156401
Bromodomain and PHD finger containing, 3a.
  
0.788
ing5
Inhibitor of growth protein.
    
 0.770
kat8
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.636
kat5
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.636
LOC101165809
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.636
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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