STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mlf2Myeloid leukemia factor 2. (247 aa)    
Predicted Functional Partners:
polr2c
Polymerase (RNA) II (DNA directed) polypeptide C.
   
  
 0.570
n6amt1
N-6 adenine-specific DNA methyltransferase 1.
      
 0.559
CROCC
Ciliary rootlet coiled-coil, rootletin.
      
 0.559
arfgap2
ADP-ribosylation factor GTPase activating protein 2.
      
 0.559
LOC101158865
Dimethylarginine dimethylaminohydrolase 2.
      
 0.531
bag5
BCL2 associated athanogene 5.
    
 
 0.457
actl6a
Actin-like 6A; Belongs to the actin family.
      
 0.441
LOC101174218
J domain-containing protein.
    
 
 0.429
dnajb6
DnaJ heat shock protein family (Hsp40) member B6b.
    
 
 0.429
dnajb2
DnaJ heat shock protein family (Hsp40) member B2.
    
 
 0.429
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.