STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKS6Ankyrin repeat and sterile alpha motif domain containing 6. (922 aa)    
Predicted Functional Partners:
anks3
Ankyrin repeat and sterile alpha motif domain containing 3.
  
 
 
0.939
nek8
NIMA-related kinase 8.
   
 0.767
nphp3
Nephronophthisis 3.
   
 0.699
NEK9
NIMA related kinase 9.
   
 0.696
nek6
NIMA-related kinase 6; Belongs to the protein kinase superfamily.
    
 
 0.610
nek7
NIMA-related kinase 7; Belongs to the protein kinase superfamily.
    
 
 0.610
invs
Inversin.
    
 
0.588
ift22
Intraflagellar transport 22 homolog (Chlamydomonas).
    
 0.540
ift81
Intraflagellar transport 81 homolog.
    
 0.496
ift172
Intraflagellar transport 172.
    
 0.486
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.