STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101170775Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (664 aa)    
Predicted Functional Partners:
notch1
Notch receptor 1b.
   
0.884
LOC101171596
Notch receptor 1a.
   
0.884
LOC101162450
Notch receptor 3.
    
0.834
H2LGV0_ORYLA
ANK_REP_REGION domain-containing protein.
 
   
  0.833
arnt
Aryl hydrocarbon receptor nuclear translocator.
   
 
 0.570
LOC101174729
Aryl hydrocarbon receptor 2.
   
 
 0.564
rbpjl
Recombination signal binding protein for immunoglobulin kappa J region-like.
    
 0.561
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.526
eys
Uncharacterized protein.
    
0.517
ENSORLP00000032656
Uncharacterized protein.
   
 0.472
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.