STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gas2l1Growth arrest-specific 2 like 1. (1077 aa)    
Predicted Functional Partners:
catip
Ciliogenesis associated TTC17 interacting protein.
   
  0.643
cfap65
Si:ch1073-349o24.2.
   
  0.606
ak8
Adenylate kinase 8; Belongs to the adenylate kinase family.
   
    0.593
ENSORLP00000029432
Mitochondrial ribosomal protein S5.
      
 0.559
mapre1
Microtubule-associated protein, RP/EB family, member 1b.
    
 
 0.524
ascc2
Activating signal cointegrator 1 complex subunit 2.
      
 0.487
LOC101173720
Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]
    
 0.479
trrap
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.428
tada3
Transcriptional adaptor 3 (NGG1 homolog, yeast)-like.
    
 0.422
H2M6E4_ORYLA
Uncharacterized protein.
    
 0.415
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.