STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101159516Neuregulin 2b. (712 aa)    
Predicted Functional Partners:
erbb3
Protein kinase domain-containing protein.
    
 0.969
LOC101172978
Erb-b2 receptor tyrosine kinase 3b.
    
 0.969
erbb4
Receptor protein-tyrosine kinase.
    
 0.969
LOC101165379
Receptor protein-tyrosine kinase.
    
 0.969
LOC101164582
Neuregulin 2a.
  
  
0.905
LOC101164994
5-hydroxytryptamine (serotonin) receptor 3A; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
  
 0.795
LOC101169984
Receptor protein-tyrosine kinase.
    
 0.703
LOC101174230
Receptor protein-tyrosine kinase.
    
 0.703
egfr
Receptor protein-tyrosine kinase.
    
 0.703
PTPRM
Uncharacterized protein.
    
 0.692
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.